Czech J. Anim. Sci., 2013, 58(10):460-469 | DOI: 10.17221/6995-CJAS

Identification of Levica yeasts as a potential ruminal microbial additiveOriginal Paper

Y. Marrero1,2, M.E. Burrola-Barraza1, Y. Castillo1, L.C. Basso3, C.A. Rosa4, O. Ruiz1, E. González-Rodríguez1
1 Faculty of Zootechnics and Ecology, Autonomous University of Chihuahua, Chihuahua, Mexico
2 Institute of Animal Science (ICA), San José de las Lajas, Cuba
3 Department of Biological Sciences, ESALQ University of Sao Paulo, Sao Paulo, Brazil
4 Department of Microbiology, Biological Science Institute, Federal University of Minas Gerais, Belo Horizonte, Brazil

The objective of this study was to identify and characterize yeast strains isolated from the ruminal ecosystem that are capable of enhancing fermentation in bovines that consume high-fibre diets recommended by livestock feed guidelines in Cuba. The yeasts were isolated from the rumen of Holsteincows that had been fed a biofermented product. Isolated colonies were purified, identified, and characterized using biochemical and molecular methods, and their effects on ruminal fermentation were compared by measuring in vitro gas production. Thirteen new strains enhancing gas production with potential use as additives in ruminal fermentation were identified and named Levica. These strains grew successfully in detection medium for non-Saccharomyces wild yeasts and had long survival periods in the rumen. PFGE analysis found four karyotypes and homology of D1/D2 domain of gene 26S rDNA sequence was similar to that of I. orientalis, R. mucilaginosa, P. guilliermondii, and C. tropicalis. Phylogenetic analysis classified the strains into clades A and B. Clade A was further divided into groups AI, AII, BI, and BII. The AI cluster contained Levica (L)23, L24, L29, L33, and formed a monophyletic group with I. orientalis, while group AII contained L18 and formed a monophyletic group with R. muciloginosa. The BI cluster contained L13, L15, L17, L27, L28, and L32, all derived from P. guilliermondii. Cluster BII was composed only of L25 located in a separate subclade, forming a monophyletic group with C. tropicalis. The most useful strain for preparing microbial feed products to improve ruminal fermentation was L25 because it showed an increase in gas production.

Keywords: fermentation; bovine; rumen ecosystem

Published: October 31, 2013  Show citation

ACS AIP APA ASA Harvard Chicago Chicago Notes IEEE ISO690 MLA NLM Turabian Vancouver
Marrero Y, Burrola-Barraza ME, Castillo Y, Basso LC, Rosa CA, Ruiz O, González-Rodríguez E. Identification of Levica yeasts as a potential ruminal microbial additive. Czech J. Anim. Sci. 2013;58(10):460-469. doi: 10.17221/6995-CJAS.
Download citation

References

  1. Altschul S.F., Madden T.L., Schäffer J.Z., Zhang J., Zhang Z., Miller W., Lipman D.J. (1997): Gapped BLAST and PSI-BLAST, a new generation of protein database search programs. Nucleic Acids Research, 25, 3389-3402. Go to original source... Go to PubMed...
  2. Angeles C.S., Mendoza G.D., Castrejon P.F., Cobos P.M. (1995): Evaluation of two SC yeast cultures to commercial dose on protozoal population and ruminal metabolism in sheep fed with a diet based on corn stover. Revista Argentina de Producción Animal, 15, 549-551. (in Spanish)
  3. Ardhana M.M., Fleet G.H. (2003): The microbial ecology of cocoa bean fermentations in Indonesia. International Journal of Food Microbiology, 86, 87-99. Go to original source... Go to PubMed...
  4. Basso L.C., Amorim H.V., Oliveira A.J., Lopes M.L. (2008): Yeast selection for fuel ethanol production in Brazil. FEMS Yeast Research, 8, 1155-1163. Go to original source... Go to PubMed...
  5. Biricik H., Turkman I.I. (2001): The effect of Saccharomyces cerevisiae on in vitro rumen digestibilities of dry matter, organic matter and neutral detergent fibre of different forage : concentrate ratios in diets. Veteriner Fakultesi Dergisi, Uludag Universitesi, 20, 29-33.
  6. Blondin B., Vézinhet F. (1988): Identification de souches de levures oenologiques par leurs caryotypes obtenus em électrophorèse en champ pulsé. Révue Française d'Oenoligie, 28, 7-11.
  7. Chaucheyras-Durand F., Masséglia S., Fonty G. (2005): Effect of the microbial feed additive Saccharomyces cerevisiae CNCM I-1077 on protein and peptide degrading activities of rumen bacteria grown in vitro. Current Microbiology, 50, 96-101. Go to original source... Go to PubMed...
  8. Chaucheyras-Durand F., Walker N.D., Bach A. (2008): Effects of active dry yeasts on the rumen microbial ecosystem: past, present and future. Animal Feed Science and Technology, 145, 5-26. Go to original source...
  9. Dole¾al P., Dole¾al J., Tøináctý J. (2005): The effect of Saccharomyces cerevisiae on ruminal fermentation in dairy cows. Czech Journal of Animal Science, 50, 503-510. Go to original source...
  10. Doreau M., Jouany J.P. (1998): Effect of a Saccharomyces cerevisiae culture on nutrient digestion in lactating dairy cows. Journal of Dairy Science, 81, 3214-3221. Go to original source... Go to PubMed...
  11. El-Ghani A. (2004): Influence of diet supplementation with yeast culture (Saccharomyces cerevisiae) on performance of Zaraibi goats. Small Ruminant Research, 52, 223-229. Go to original source...
  12. Ettayebi K., Errachidi F., Jamai L., Tahri-Jouti M.A., Sendide K., Ettayebi M. (2003): Biodegradation of polyphenols with immobilized Candida tropicalis under metabolic induction. FEMS Microbiology Letters, 223, 215-219. Go to original source... Go to PubMed...
  13. Felsenstein J. (1993): PHYLIP - Phylogeny Inference Package (Version 3.2.). Cladistics, 5, 164-166.
  14. García-Suárez J., Gómez-Herruz P., Cuadros J.A., Burgaleta C. (2011): Epidemiology and outcome of Rhodotorula infection in haematological patients. Mycoses, 54, 318-324. Go to original source... Go to PubMed...
  15. Guamán-Burneo C., Carvajal-Barriga J. (2009): Characterization and identification of isolates of carotenogenic yeast strains from several natural zones of Ecuador. Universitas Scientiarum, 14, 187-197. (in Spanish) Go to original source...
  16. Hirimuthugoda N.Y., Chi Z., Li X., Wang L., Wu L. (2006): Diversity of phytase-producing marine yeasts. Ciencias Marinas, 32, 673-682. Go to original source...
  17. Jimoh S.O., Ado S.A., Ameh J.B., Whong C.M.Z. (2011): Characteristics and diversity of yeast in locally fermented beverages sold in Nigeria. Research Journal of Biological Sciences, 6, 389-392.
  18. Jouany J.P. (2001): A new look at yeast cultures as probiotics for ruminants. Feed Mix, 9, 17-19.
  19. Kimura M. (1980): A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution, 16, 111-120. Go to original source... Go to PubMed...
  20. Kung L., Kreck E.M., Tung R.S., Hession A.O., Sheperd A.C., Cohen M.A., Swain H.E., Leedle J.A.Z. (1997): Effects of a live yeast culture and enzymes on in vitro ruminal fermentation and milk production of dairy cows. Journal of Dairy Science, 80, 2045-2051. Go to original source... Go to PubMed...
  21. Kurtzman C.P., Robnett C.J. (1998): Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial sequences. Antonie van Leeuwenhoek, 73, 331-371. Go to original source... Go to PubMed...
  22. Lachance M.A., Bowles J.M., Starmer W.T., Baker S.E. (1999): Kodamaea kakaduensis and Candida tolerans, two new ascomycetous yeast species from Australian Hibiscus flowers. Canadian Journal of Microbiology, 45, 172-177. Go to original source... Go to PubMed...
  23. Lee J.H., Lim Y.B., Koh J.H., Baig S.Y., Shin H.T. (2002): Screening of thermotolerant yeast for use as microbial feed additive. Journal of Microbiology and Biotechnology, 12, 162-165.
  24. Lila Z.A., Mohammed N., Yasui T., Kurokawa Y., Kanda S., Itabashi H. (2004): Effects of Saccharomyces cerevisiae twin of live cells on mixed ruminal microorganism fermentation in vitro. Journal of Dairy Science, 82, 1847-1854. Go to original source... Go to PubMed...
  25. Marrero Y., Galindo J., Álvarez E., Torres V., Aldana A.I., Boucourt R., Elías A., Delgado D. (2005): Methodology for the isolation and characterization of yeast from the ruminal ecosystem. Cuban Journal of Agricultural Science, 39, 45-50.
  26. Mendoza D.G., Ricalde R., Esparza H., Velázquez L. (1995): Effect of two SC cultures in ruminal digestion in DM and NDF of wheat straw. Revista Argentina de Producción Animal, 15, 464-465. (in Spanish)
  27. Newbold C.J., McIntosh F.M., Wallace R.J. (1998): Changes in the microbial population of a rumen-simulating fermenter in response to yeast culture. Canadian Journal of Animal Science, 78, 241-244. Go to original source...
  28. Priji P., Unni K.N., Sajith S., Benjamin S. (2013): Candida tropicalis BPU1, a novel isolate from the rumen of the Malabari goat, is a dual producer of biosurfactant and polyhydroxybutyrate. Yeast, 30, 103-110. Go to original source... Go to PubMed...
  29. Saitou N., Nei M. (1987): The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution, 4, 406-425. Go to PubMed...
  30. Stella A.V., Paratte R.,Valnegri L., Cigalino G., Soncini G., Chevaux E., Dell'Orto V., Savoini G. (2007): Effect of administration of live Saccharomyces cerevisiae on milk production, milk composition, blood metabolites, and faecal flora in early lactating dairy goats. Small Ruminant Research, 67, 7-13. Go to original source...
  31. Theodorou M.K., Williams B.A., Dhanoa M.S., McAllan A.D.B., France J. (1994): A simple gas production method using a pressure transducer to determine the fermentation kinetics of ruminant feeds. Animal Feed Science and Technology, 48, 185-197. Go to original source...
  32. Thompson J.D., Higgins D.G., Gibson T.J. (1994): CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research, 22, 4673-4680. Go to original source... Go to PubMed...
  33. Vaughan-Martini A., Kurtzman C.P., Meyer S.A., O'Neill E.B. (2005): Two new species in the Pichia guilliermondii clade: Pichia caribbica sp. nov., the ascosporic state of Candida fermentati, and Candida carpophila comb. nov. FEMS Yeast Research, 5, 463-469. Go to original source... Go to PubMed...
  34. Wickerham L.J. (1952): Recent advances in the taxonomy of yeast. Annual Review of Microbiology, 6, 317-332. Go to original source... Go to PubMed...
  35. Williams A.G., Withers S., Joblin K.N. (1991): Xylanolysis by cocultures of the rumen fungus Neocallimastix frontalis and ruminal bacteria. Letters in Applied Microbiology, 12, 232-235. Go to original source...
  36. Wohlt J.E., Corcione T.T., Zajac P.K. (1998): Effect of yeast on feed intake and performance of cows fed diets based on corn silage during early lactation. Journal of Dairy Science, 81, 1345-1352. Go to original source... Go to PubMed...

This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International (CC BY NC 4.0), which permits non-comercial use, distribution, and reproduction in any medium, provided the original publication is properly cited. No use, distribution or reproduction is permitted which does not comply with these terms.