Czech J. Anim. Sci., 2018, 63(6):212-221 | DOI: 10.17221/21/2017-CJAS

Genetic evaluation of growth traits in Nellore cattle through multi-trait and random regression modelsOriginal Paper

Bruno Bastos Teixeira1, Rodrigo Reis Mota*,2, Raysildo Barbosa Lôbo3, Luciano Pinheiro da Silva4, Antônio Policarpo Souza Carneiro5, Felipe Gomes da Silva6, Giovani da Costa Caetano7, Fabyano Fonseca e Silva7
1 Departament of Basic Sciences, Federal University of Vales do Jequitinhonha e Mucuri, Diamantina, Brazil
2 TERRA Teaching and Research Centre, Gembloux Agro-Bio Tech, University of Liège, Gembloux, Belgium
3 Department of Genetics, University of São Paulo, Ribeirão Preto, Brazil
4 Departament of Animal Science, Federal University of Ceará, Fortaleza, Brazil
5 Departament of Statistics, Federal University of Viçosa, Viçosa, Brazil
6 Departament of Animal Science and Rural Extension, Federal University of Mato Grosso, Cuiabá, Brazil
7 Departament of Animal Science, Federal University of Viçosa, Viçosa, Brazil

We aimed to evaluate different orders of fixed and random effects in random regression models (RRM) based on Legendre orthogonal polynomials as well as to verify the feasibility of these models to describe growth curves in Nellore cattle. The proposed RRM were also compared to multi-trait models (MTM). Variance components and genetic parameters estimates were performed via REML for all models. Twelve RRM were compared through Akaike (AIC) and Bayesian (BIC) information criteria. The model of order three for the fixed curve and four for all random effects (direct genetic, maternal genetic, permanent environment, and maternal permanent environment) fits best. Estimates of direct genetic, maternal genetic, maternal permanent environment, permanent environment, phenotypic and residual variances were similar between MTM and RRM. Heritability estimates were higher via RRM. We presented perspectives for the use of RRM for genetic evaluation of growth traits in Brazilian Nellore cattle. In general, moderate heritability estimates were obtained for the majority of studied traits when using RRM. Additionally, the precision of these estimates was higher when using RRM instead of MTM. However, concerns about the variance components estimates in advanced ages via Legendre polynomial must be taken into account in future studies.

Keywords: body weight; genetic parameters; growth curves

Published: June 30, 2018  Show citation

ACS AIP APA ASA Harvard Chicago Chicago Notes IEEE ISO690 MLA NLM Turabian Vancouver
Teixeira BB, Mota RR, Lôbo RB, da Silva LP, Souza Carneiro AP, da Silva FG, et al.. Genetic evaluation of growth traits in Nellore cattle through multi-trait and random regression models. Czech J. Anim. Sci. 2018;63(6):212-221. doi: 10.17221/21/2017-CJAS.
Download citation

References

  1. Arango J.A., Cundiff L.V., Van Vleck L.D. (2002): Genetic parameters for weight, weight adjusted for body condition score, height, and body condition score in beef cows. Journal of Animal Science, 80, 3112-3122. Go to original source... Go to PubMed...
  2. Araujo C.V., Torres R.A., Costa C.N., Torres Filho R.A., Araujo S.I., Lopes P.S., Sarmento J.L.R. (2006): Genetic modelling of daily milk yield using orthogonal polynomials in random regression. Brazilian Journal of Animal Science, 35, 967-974. (in Portuguese)
  3. Boligon A.A., Mercadante M.E.Z., Baldi F., Lobo R.B., Albuquerque L.G. (2009): Multi-trait and random regression mature weight heritability and breeding value estimates in Nelore cattle. South African Journal of Animal Science, 39, 145-148. Go to original source...
  4. Boligon A.A., Mercadante M.E.Z., Forni S., Lobo R.B., Albuquerque L.G. (2010): Covariance functions for body weight from birth to maturity in Nellore cows. Journal of Animal Science, 88, 849-859. Go to original source... Go to PubMed...
  5. Cyrillo J., Alencar M.M., Razook A.G., Mercadante M.E.Z., Figueiredo L.A. (2004): Modeling and estimation of genetic parameters for weights from birth to selection age (378 days) of Nellore males. Brazilian Journal of Animal Science, 33, 1405-1415. (in Portuguese) Go to original source...
  6. Dias L.T., Albuquerque L.G., Tonhati H., Teixeira R.A. (2005): Estimation of genetic parameters for weight in different ages in Tabapua cattle. Brazilian Journal of Animal Science, 34, 1914-1919. (in Portuguese) Go to original source...
  7. Fischer T.M., Van der Werf J.H.J., Banks R.G., Ball A.J. (2004): Description of lamb growth using random regression on field data. Livestock Production Science, 89, 175-185. Go to original source...
  8. Garneiro A.D.E.L.V., Lobo R.B., Bezerra L.A.F. (2001): Comparison between some selection criteria for growth traits correlated to scrotal circumference. Brazilian Journal of Animal Science, 30, 714-718. (in Portuguese)
  9. Ghafouri-Kesbi G.F., Eskandarinasab M., Shahir M.H. (2008): Estimation of direct and maternal effects on body weight in Mehraban sheep using random regression models. Archiv Tierzucht, 51, 235-246. Go to original source...
  10. Goncalves F.M., Pires A.V., Pereira I.G., Garcia D.A., Farah M.M., Meira C.T., Cruz V.A. (2011): Genetic evaluation for body weight in a Nellore herd. Brazilian Journal of Veterinary and Animal Sciences, 63, 158-164. (in Portuguese) Go to original source...
  11. Laureano M.M.M., Boligon A.A., Costa R.B., Forni S., Severo J.L.P., Albuquerque L.G. (2011): Estimates of heritability and genetic trends for growth and reproduction traits in Nelore cattle. Brazilian Journal of Veterinary and Animal Sciences, 63, 143-152. (in Portuguese) Go to original source...
  12. Martins G., Martins R., Melo F., Braga R.L. (2000): Influence of genetic and environment factors on the growing traits of animals from Nellore breed at Maranhao state. Brazilian Journal of Animal Science, 29, 104-107. (in Portuguese)
  13. Menezes G.R.O., Torres R.A., Torres Jr. R.A., Silva L.O.C., Gondo A., Euclydes R.F. (2013): Estimation of genetic parameters for growth traits in Tabapua cattle using a multi-trait model. Brazilian Journal of Animal Science, 42, 570-574. Go to original source...
  14. Mrode R.A. (2014): Linear models for the prediction of animal breeding values. CABI, Wallingford, UK/Boston, USA. Go to original source...
  15. Meyer K. (2004): Scope for a random regression model in genetic evaluation of beef cattle for growth. Livestock Production Science, 86, 69-83. Go to original source...
  16. Meyer K. (2005a): Estimates of covariance functions for growth of Angus cattle from random regression analyses fitting B-spline functions. In: Proc. 16th Conf. Association for the Advancement of Animal Breeding and Genetics, 16, 52-55.
  17. Meyer K. (2005b): Random regression analyses using B-splines to model growth of Australian Angus cattle. Genetics Selection Evolution, 37: 1. Go to original source... Go to PubMed...
  18. Meyer K. (2007): WOMBAT - A tool for mixed model analyses in quantitative genetics by restricted maximum likelihood (REML). Journal of Zhejiang University Science B, 8, 815-821. Go to original source... Go to PubMed...
  19. Mota R.R., Marques L.F.A., Lopes P.S., Silva L.P., Araujo Neto F.R., Resende M.D.V., Torres R.A. (2013): Genetic evaluation using multi-trait and random regression models in Simmental beef cattle. Genetics and Molecular Research, 12, 2465-2480. Go to original source... Go to PubMed...
  20. Nobre P.R.C., Misztal I., Tsuruta S., Bertrand J.K., Silva L.O.C., Lopes P.S. (2003a): Analyses of growth curves of Nellore cattle by multiple-trait and random regression models. Journal of Animal Science, 81, 918-926. Go to original source... Go to PubMed...
  21. Nobre P.R.C., Misztal I., Tsuruta S., Bertrand J.K., Silva L.O.C., Lopes P.S. (2003b): Genetic evaluation of growth in Nellore cattle by multiple-trait and random regression models. Journal of Animal Science, 81, 927-932. Go to original source... Go to PubMed...
  22. Patterson H.D., Thompson R. (1971): Recovery of interblock information when block sizes are unequal. Biometrika, 58, 545-554. Go to original source...
  23. Rosa A.N., Lobo R.B., Oliveira H.N., Borjas A.R. (2000): Genetic variability of cow mature weight in a Nellore herd of Sao Paulo state, Brazil. Brazilian Journal of Animal Science, 29, 1706-1711. (in Portuguese) Go to original source...
  24. Sakaguti E.S., Silva M.A., Martins E.N., Lopes P.S., Silva L.O., Quaas R.L., Duarte R.G. (2002): Growth trajectory and age-of-dam effect for random regression models of young Tabapua beef cattle. Brazilian Journal of Veterinary and Animal Sciences, 54, 414-423. (in Portuguese) Go to original source...
  25. Schaeffer L.R. (2004): Application of random regression models in animal breeding. Livestock Production Science, 86, 35-45. Go to original source...
  26. Silva R.M., Souza J.C., Silva L.O.C., Silva M.V., Freitas J.A., Marcal M.F. (2013): Genetic parameters and trends for weight and age in Nellore. Revista Brasileira de Saude e Producao Animal, 14, 21-28. (in Portuguese) Go to original source...
  27. Siqueira R.L.P.G., Oliveira J.A., Lobo R.B., Bezerra L.A.F., Tonhati H. (2003): Additive genetic variability analysis in the growth characteristics of Nellore breed. Brazilian Journal of Animal Science, 32, 99-105. (in Portuguese) Go to original source...
  28. Souza J.C., Silva L.O.C., Gondo A., Freitas J.A., Malhado C.H.M., Sereno J.R.B., Lamberson W.R. (2011): Parameters and genetic trends of cattle weight rising in pasture in Brazil. Archivos de Zootecnia, 60, 457-465. (in Portuguese) Go to original source...

This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International (CC BY NC 4.0), which permits non-comercial use, distribution, and reproduction in any medium, provided the original publication is properly cited. No use, distribution or reproduction is permitted which does not comply with these terms.