Czech J. Anim. Sci., 2011, 56(9):414-426 | DOI: 10.17221/1292-CJAS
Linear and linear-threshold model for genetic parameters for SEUROP carcass traits in Czech beef cattle
- Institute of Animal Science, Prague-Uhříněves, Czech Republic
The objective of this study was to estimate genetic parameters for the results of classifying of carcass traits by the SEUROP method in beef cattle in the Czech Republic using linear and linear-threshold models. Genetic parameters were calculated and evaluated in a set of 4276 animals of eleven beef breeds and crosses with dairy and dual-purpose breeds (Aberdeen Angus - 1376, Hereford - 994, Simmental - 651, Charolais - 524, Piemontese - 185, Galloway - 162, Blonde d'Aquitaine - 147, Limousine - 106, Highland - 53, Gasconne - 44, Belgian Blue - 34) in 2005-2008. Aberdeen Angus, Hereford, Charolais and beef Simmental were the most numerous breeds. Fixed effect of a classifier, fixed regression on age at slaughter by means of Legendre polynomial of the second degree separately for the each breed and sex and fixed regression on heterosis coefficient were included in a model equation. Genetic parameters were estimated by a multi-trait animal model using a linear model and a linear-threshold model in which carcass weight (CW) was considered as the linear trait and carcass conformation (CC) and carcass fatness (CF) grading as threshold traits. The heritability coefficient for CW differed only moderately according to the method of the genetic parameter estimation (0.295 in linear model and 0.306 in linear-threshold model). The heritability coefficient for CC was 0.187 in linear model and 0.237 in linear-threshold model. The heritability coefficient for CF grading was 0.089 in linear model and 0.146 in linear-threshold model. Genetic correlation between CW and CC was high (0.823 in linear model and 0.959 in linear-threshold model), the correlation between CW and CF was intermediate (0.332 and 0.328, respectively) and it was low between CF and CC (0.071 and 0.053). If CW was included in the model equation as fixed regression using Legendre polynomial, lower heritability coefficients for CC (0.077 and 0.078) and CF (0.086 and 0.123) were calculated and the correlation between CC and CF was negative (-0.430 and -0.429).
Keywords: genetic parameters; heritability; genetic correlation; REML; EUROP
Published: September 30, 2011 Show citation
References
- Akaike H. (1973): Information theory and an extension of the maximum likelihood principle. In: 2nd Int. Symp. Information Theory, Budapest, Hungary, 267-281.
- Blackwell R.L., Knox J.H., Shelby C.E., Clark R.T. (1962): Genetic analysis of economic characteristic of young Hereford cattle. Journal of Animal Science, 21, 101- 107.
Go to original source...
- Dempster E.R., Lerner I.M. (1950): Heritability of threshold characters. Genetics, 35, 212-236.
Go to original source...
Go to PubMed...
- Eriksson S., Nasholm A., Johansson K., Philipsson J. (2003): Genetic analyses of field-recorded growth and carcass traits for Swedish beef cattle. Livestock Production Science, 84, 53-62.
Go to original source...
- Gianola D. (1982): Theory and analysis of threshold characters. Journal of Animal Science, 54, 1079-1096.
Go to original source...
- Hickey J.M., Keane M.G., Kenny D.A., Cromie A.R., Veerkamp R.F. (2007): Genetic parameters for EUROP carcass traits within different groups of cattle in Ireland. Journal of Animal Science, 85, 314-321.
Go to original source...
Go to PubMed...
- Hoeschele I., Tier B. (1995): Estimation of variance components of threshold characters by marginal posterior mode and means via Gibbs sampling. Genetic Selection Evolution, 519-540.
Go to original source...
- Jamrozik J., Schaeffer L.R., Burnside E.B., Sullivan B.P. (1991): Threshold models applied to Holstein conformation traits. Journal of Dairy Science, 74, 3196- 3201.
Go to original source...
Go to PubMed...
- Johnson D.J., Benyshek L.L., Bertrand J.K., Johnson M. H., Weiss G.W. (1992): Estimates of genetic parameters for growth and carcass traits in Charolais cattle. Canadian Journal of Animal Science, 72, 493-499.
Go to original source...
- Kadarmideen H.N., Thompson R., Simm G. (2000): Linear and threshold model genetic parameters for disease, fertility and milk production in dairy cattle. Animal Science, 71, 411-419.
Go to original source...
- Kamieniecki H., Wójcik J., Pilarczyk R., Lachowicz K., Sobczak M., Grzesiak W., Blaszczyk P. (2009): Growth and carcass performance of bull calves born from Hereford, Simmental and Charolais cows sired by Charolais bulls. Czech Journal of Animal Science, 54, 47-54.
Go to original source...
- Lee D., Misztal I., Bertrand J.K., Rekaya R. (2002): National evaluation for calving ease, gestation length and birth weight by linear and threshold model methodologies. Journal of Applied Genetics, 43, 209-216.
Go to PubMed...
- Misztal I., Gianola D., Foulley J.L. (1989): Computing aspects of a nonlinear method of sire evaluation for categorical data. Journal of Dairy Science, 72, 1557- 1568.
Go to original source...
- Misztal I., Tsuruta S., Strabel T., Auvray B., Druet T., Lee D.H. (2002): BLUPF90 and related programs (BGF90). In: 7th World Congr. Genetics Applied to Livestock Production, Montpelier, France, 19-23 August 2002, 28 pp.
- Moreno C., Sorensen D., Garcia Cortes L.A., Varona L., Altarriba J. (1997): On biased inference about variance components in the binary threshold model. Genetic Selection Evolution, 145-160.
Go to original source...
- Oliver A., Mendizabal J.A., Ripoll G., Alberti P., Purroy A. (2010): Predicting meat yields and commercial meat cuts from carcasses of young bulls of Spanish breeds by the SEUROP method and an image analysis system. Meat Science, 84, 628-633.
Go to original source...
Go to PubMed...
- Pabiou T., Fikse F., Nasholm A., Cromie A.R., Drennan M.D., Keane M.G., Berry D.P. (2008): Genetic parameters for carcass cuts yields in Beef Cattle. Interbull Bulletin, 38, 18-24.
- Parkkonen P., Liinamo A.E., Ojala M. (2000): Estimates of genetic parameters for carcass traits in Finnish Ayrshire and Holstein-Frisian. Livestock Production Science, 64, 203-213.
Go to original source...
- Přibyl J., Misztal I., Přibylová J., Šeba K. (2003): Multiplebreed, Multiple-traits evaluation of beef cattle in the Czech Republic. Czech Journal of Animal Science, 48, 519-532.
- Přibyl J., Krejčová H., Přibylová J., Misztal I., Bohmanová J., Štípková M. (2007): Trajectory of body weight of performance tested dual-purpose bulls. Czech Journal of Animal Science, 52, 315-324.
Go to original source...
- Přibylová J., Vostrý L., Veselá Z., Přibyl J., Bohmanová J. (2004): Breeding value for own growth of beef bulls in performance-test station. Animal Science Papers and Reports, 2, 97-103.
- Ramirez-Valverde R., Misztal I., Bertrand J.K. (2001): Comparison of threshold vs linear and animal vs sire models for predicting direct and maternal genetic effects on calving difficulty in beef cattle. Journal of Animal Science, 79, 333-338.
Go to original source...
Go to PubMed...
- Rios-Utrera A., Van Vleck L.D. (2004): Heritability estimates for carcass traits of cattle: a review. Genetic and Molecular Research, 3, 380-394.
- SAS (2004): SAS/STAT 9.1 User's Guide. Statistical Analysis System, SAS Publishing, Cary, USA, 5136 pp.
- Varona L., Misztal I., Bertrand J.K. (1999): Thresholdlinear versus linear-linear analysis of birth weight and calving easy using an animal model: II. Comparison of models. Journal of Animal Science, 77, 2003-2007.
Go to original source...
Go to PubMed...
- Varona L., Moreno C., Altarriba J. (2009): A model with heterogeneous thresholds for subjective traits: Fat cover and conformation score in the Pirenaica beef cattle. Journal of Animal Science, 87, 1210-1217.
Go to original source...
Go to PubMed...
- Veselá Z., Přibyl J., Šafus P., Vostrý L., Šeba K., Štolc L. (2005): Breeding value for type traits in beef cattle in the Czech Republic. Czech Journal of Animal Science, 50, 385-393.
Go to original source...
- Wang C.S., Quaas R.L., Pollak E.J. (1997): Bayesian analysis of calving easy score and birth weights. Genetic Selection Evolution, 29, 117-143.
Go to original source...
- Weglarz A. (2010): Meat quality defined based on pH and colour depending on cattle category and slaughtered season. Czech Journal of Animal Science, 55, 548- 556.
Go to original source...
- Wiggans G.R., Misztal I., Van Tassell C.P. (2003): Calving easy (co)variance components for a sire maternal grandsire Threshold model. Journal of Dairy Science, 86, 1845-1848.
Go to original source...
Go to PubMed...
- Wright S. (1934): An analysis of variability in number of digits in an inbred strain of guinea pigs. Genetics 19, 506-536.
Go to original source...
Go to PubMed...
This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International (CC BY NC 4.0), which permits non-comercial use, distribution, and reproduction in any medium, provided the original publication is properly cited. No use, distribution or reproduction is permitted which does not comply with these terms.